Mercurial > repos > lecorguille > trinity_stats
annotate trinity_stats.xml @ 1:8106cba8ba2b draft default tip
planemo upload
| author | lecorguille |
|---|---|
| date | Tue, 15 Nov 2016 10:24:48 -0500 |
| parents | 5ea4163b1519 |
| children |
| rev | line source |
|---|---|
| 0 | 1 <tool id="trinity_stats" name="Trinity Statistics" version="2.2.0.0" > |
| 2 <description>Obtain basic stats for the number of genes and isoforms and contiguity of the assembly</description> | |
| 1 | 3 <requirements> |
| 4 <requirement type="package" version="2.2.0">trinity</requirement> | |
| 5 </requirements> | |
| 0 | 6 <command> |
| 7 TrinityStats.pl '$trinity_assembly' > '$output' | |
| 8 </command> | |
| 9 <inputs> | |
| 10 <param type="data" format="fasta" name="trinity_assembly" label="Trinity assembly" /> | |
| 11 </inputs> | |
| 12 <outputs> | |
| 13 <data format="tabular" name="output" label="Trinity_Assembly.statistics" /> | |
| 14 </outputs> | |
| 15 </tool> |