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author lecorguille
date Tue, 15 Nov 2016 10:24:48 -0500
parents 5ea4163b1519
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<tool id="trinity_stats" name="Trinity Statistics" version="2.2.0.0" >
    <description>Obtain basic stats for the number of genes and isoforms and contiguity of the assembly</description>
    <requirements>
	<requirement type="package" version="2.2.0">trinity</requirement>
    </requirements>
    <command>
        TrinityStats.pl '$trinity_assembly' > '$output'
    </command>
    <inputs>
        <param type="data" format="fasta" name="trinity_assembly" label="Trinity assembly" />
    </inputs>
    <outputs>
        <data format="tabular" name="output" label="Trinity_Assembly.statistics" />
    </outputs>
</tool>