Mercurial > repos > lecorguille > trinity_stats
comparison trinity_stats.xml @ 1:8106cba8ba2b draft default tip
planemo upload
| author | lecorguille |
|---|---|
| date | Tue, 15 Nov 2016 10:24:48 -0500 |
| parents | 5ea4163b1519 |
| children |
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| 0:5ea4163b1519 | 1:8106cba8ba2b |
|---|---|
| 1 <tool id="trinity_stats" name="Trinity Statistics" version="2.2.0.0" > | 1 <tool id="trinity_stats" name="Trinity Statistics" version="2.2.0.0" > |
| 2 <description>Obtain basic stats for the number of genes and isoforms and contiguity of the assembly</description> | 2 <description>Obtain basic stats for the number of genes and isoforms and contiguity of the assembly</description> |
| 3 <requirement type="package" version="2.2.0">trinity</requirement> | 3 <requirements> |
| 4 <requirement type="package" version="2.2.0">trinity</requirement> | |
| 5 </requirements> | |
| 4 <command> | 6 <command> |
| 5 TrinityStats.pl '$trinity_assembly' > '$output' | 7 TrinityStats.pl '$trinity_assembly' > '$output' |
| 6 </command> | 8 </command> |
| 7 <inputs> | 9 <inputs> |
| 8 <param type="data" format="fasta" name="trinity_assembly" label="Trinity assembly" /> | 10 <param type="data" format="fasta" name="trinity_assembly" label="Trinity assembly" /> |