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annotate tool_dependencies.xml @ 38:8c7125d5ce6f draft

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downgrade pybedtools; add pysam dep
author rnateam
date Fri, 18 Dec 2015 04:10:35 -0500
parents 744e4f2b972c
children 2a21d164bef1
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="biopython" version="1.66">
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aff2c7260894 integrate dsc and package updates
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4 <repository changeset_revision="907c57486667" name="package_python_2_7_biopython_1_66" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="pandas" version="0.16">
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7 <repository changeset_revision="8766fb73e88f" name="package_python_2_7_pandas_0_16" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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8 </package>
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744e4f2b972c try pybedtools 0.6.9
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9 <package name="pybedtools" version="0.6.9">
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10 <repository changeset_revision="cacefebcb209" name="package_python_2_7_pybedtools_0_6_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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885602df4554 another try with bedtools dependency
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11 </package>
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8c7125d5ce6f downgrade pybedtools; add pysam dep
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12 <package name="pysam" version="0.8.3">
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13 <repository changeset_revision="f88a5f4ac6c1" name="package_python_2_7_pysam_0_8_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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14 </package>
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15 <package name="flexbar" version="2.5">
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16 <repository changeset_revision="45d1b8373762" name="package_flexbar_2_5" owner="rnateam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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17 </package>
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18 </tool_dependency>