Mercurial > repos > rnateam > bctools

changeset 38:8c7125d5ce6f draft

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downgrade pybedtools; add pysam dep
author rnateam
date Fri, 18 Dec 2015 04:10:35 -0500
parents 744e4f2b972c
children af6532376d8c
files macros.xml tool_dependencies.xml
diffstat 2 files changed, 4 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Fri Dec 18 03:49:54 2015 -0500
+++ b/macros.xml	Fri Dec 18 04:10:35 2015 -0500
@@ -4,6 +4,7 @@
             <requirement type="package" version="1.66">biopython</requirement>
             <requirement type="package" version="0.16">pandas</requirement>
             <requirement type="package" version="0.6.9">pybedtools</requirement>
+            <requirement type="package" version="0.8.3">pysam</requirement>
         </requirements>
     </xml>
     <xml name="stdio">
--- a/tool_dependencies.xml	Fri Dec 18 03:49:54 2015 -0500
+++ b/tool_dependencies.xml	Fri Dec 18 04:10:35 2015 -0500
@@ -9,6 +9,9 @@
     <package name="pybedtools" version="0.6.9">
         <repository changeset_revision="cacefebcb209" name="package_python_2_7_pybedtools_0_6_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
+    <package name="pysam" version="0.8.3">
+        <repository changeset_revision="f88a5f4ac6c1" name="package_python_2_7_pysam_0_8_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
     <package name="flexbar" version="2.5">
         <repository changeset_revision="45d1b8373762" name="package_flexbar_2_5" owner="rnateam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>