Mercurial > repos > matt-shirley > sra_tools
changeset 32:a7d8d22f9ad2 draft
debug prefetch caching and accession input for fastq_dump
| author | Matt Shirley <mdshw5@gmail.com> |
|---|---|
| date | Sun, 30 Jun 2013 11:27:51 -0400 |
| parents | 85e47f636e10 |
| children | 9ad900168ded |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 2 insertions(+), 0 deletions(-) [+] |
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--- a/tool_dependencies.xml Sun Jun 30 11:12:31 2013 -0400 +++ b/tool_dependencies.xml Sun Jun 30 11:27:51 2013 -0400 @@ -8,6 +8,8 @@ <action type="shell_command">make static</action> <action type="shell_command">make</action> <action type="make_directory">$INSTALL_DIR/bin</action> + <action type="make_directory">$INSTALL_DIR/ncbi</action> + <action type="make_directory">$INSTALL_DIR/ncbi/public</action> <action type="shell_command">sed -i -e "s|\$(HOME)|$INSTALL_DIR|g" bin64/ncbi/default.kfg</action> <action type="shell_command">cp --recursive --dereference bin64/* $INSTALL_DIR/bin</action> <action type="set_environment"><environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable></action>