# HG changeset patch
# User Matt Shirley <mdshw5@gmail.com>
# Date 1372606071 14400
# Node ID a7d8d22f9ad221f7f6ae60508e5ceb4172c8f811
# Parent  85e47f636e106fe6ea12a154bfd7581f9fd11a1a
debug prefetch caching and accession input for fastq_dump

diff -r 85e47f636e10 -r a7d8d22f9ad2 tool_dependencies.xml
--- a/tool_dependencies.xml	Sun Jun 30 11:12:31 2013 -0400
+++ b/tool_dependencies.xml	Sun Jun 30 11:27:51 2013 -0400
@@ -8,6 +8,8 @@
 	<action type="shell_command">make static</action>
 	<action type="shell_command">make</action>
 	<action type="make_directory">$INSTALL_DIR/bin</action>	
+	<action type="make_directory">$INSTALL_DIR/ncbi</action>	
+	<action type="make_directory">$INSTALL_DIR/ncbi/public</action>	
 	<action type="shell_command">sed -i -e "s|\$(HOME)|$INSTALL_DIR|g" bin64/ncbi/default.kfg</action>
 	<action type="shell_command">cp --recursive --dereference bin64/* $INSTALL_DIR/bin</action>
 	<action type="set_environment"><environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable></action>