changeset 6:d36991c26cdd draft

Uploaded
author jeremie
date Fri, 27 Jun 2014 04:36:57 -0400
parents 490363104b25
children 958e643e7c44
files breakdancer.xml
diffstat 1 files changed, 8 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/breakdancer.xml	Fri Jun 27 04:27:52 2014 -0400
+++ b/breakdancer.xml	Fri Jun 27 04:36:57 2014 -0400
@@ -1,16 +1,20 @@
 <tool id="breakdancer" name="breakdancer" version="1.2.6">
+	<requirements>
+		<requirement type="package">package_breakdancer_1_2_6</requirement>
+	</requirements>
+
 	<description></description>
+
 	<parallelism method="basic"></parallelism>
-		<command interpreter="python">
+
+	<command interpreter="python">
 			breakdancer.py
 			-i1 $input
 			-o1 $output_raw
 			-o2 $output_vcf
 	</command>
 
- <!--  <requirements>
-		<requirement type="package">breakdancer-max</requirement>
-	</requirements> -->
+	
 
 	<inputs>
 		<param format="bam" name="input" type="data" help=""  label="bam file" />