Mercurial > repos > jeremie > breakdancer_test
changeset 6:d36991c26cdd draft
Uploaded
author | jeremie |
---|---|
date | Fri, 27 Jun 2014 04:36:57 -0400 |
parents | 490363104b25 |
children | 958e643e7c44 |
files | breakdancer.xml |
diffstat | 1 files changed, 8 insertions(+), 4 deletions(-) [+] |
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--- a/breakdancer.xml Fri Jun 27 04:27:52 2014 -0400 +++ b/breakdancer.xml Fri Jun 27 04:36:57 2014 -0400 @@ -1,16 +1,20 @@ <tool id="breakdancer" name="breakdancer" version="1.2.6"> + <requirements> + <requirement type="package">package_breakdancer_1_2_6</requirement> + </requirements> + <description></description> + <parallelism method="basic"></parallelism> - <command interpreter="python"> + + <command interpreter="python"> breakdancer.py -i1 $input -o1 $output_raw -o2 $output_vcf </command> - <!-- <requirements> - <requirement type="package">breakdancer-max</requirement> - </requirements> --> + <inputs> <param format="bam" name="input" type="data" help="" label="bam file" />