Mercurial > repos > charles_s_test > seqsero2

annotate test.txt @ 7:3d6680af0bec draft

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planemo upload commit a4fb57231f274270afbfebd47f67df05babffa4a-dirty
author charles_s_test
date Mon, 27 Nov 2017 16:30:27 -0500
parents 38ad1130d077
children b04931a9fe71
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1 monkey /galaxydir/galaxy/tools/GalaxySeqsero/run_seqsero.py /galaxydir/galaxy/database/files/000/dataset_1.dat,/galaxydir/galaxy/database/files/000/dataset_2.dat /galaxydir/galaxy/tools/GalaxySeqsero/
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3 /galaxydir/galaxy/tools/GalaxySeqsero/run_seqsero.py /galaxydir/galaxy/database/files/000/dataset_1.dat,/galaxydir/galaxy/database/files/000/dataset_2.dat /galaxydir/galaxy/tools/GalaxySeqsero/
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6 ('\n', '\n')
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7 Input files: dataset_1_SRR1198853.fastq dataset_2_SRR1198853.fastq
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8 O antigen prediction: O-?
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9 H1 antigen prediction(fliC): k
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10 H2 antigen prediction(fljB): 1,5
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11 Predicted antigenic profile: ?:k:1,5
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12 Predicted serotype(s): N/A (The predicted antigenic profile does not exist in the White-Kauffmann-Le Minor scheme)
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14 check fastq id and make them in accordance with each other...please wait...
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18 Result:
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21 None
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22 Mon Nov 27 16:25:00 2017