Mercurial > repos > charles_s_test > seqsero2

annotate test.txt @ 0:6895de35a263 draft

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planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
author charles_s_test
date Thu, 19 Oct 2017 18:16:51 -0400
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children 8cd7fc65c3a7
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1 monkey /nfs/sw/apps/galaxy-dev/galaxy/tools/seqsero/run_seqsero_batch_galaxy.py /nfs/sw/apps/galaxy-dev/galaxy/database/files/000/dataset_304.dat,/nfs/sw/apps/galaxy-dev/galaxy/database/files/000/dataset_303.dat
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3 /nfs/sw/apps/galaxy-dev/galaxy/tools/seqsero/run_seqsero_batch_galaxy.py /nfs/sw/apps/galaxy-dev/galaxy/database/files/000/dataset_304.dat,/nfs/sw/apps/galaxy-dev/galaxy/database/files/000/dataset_303.dat
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9 Input files: dataset_304_F1605001-005-2C1.fsa dataset_303_F1605001-005-2C2.fsa
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10 O antigen prediction: O--
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11 H1 antigen prediction(fliC): -
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12 H2 antigen prediction(fljB): -
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13 Predicted antigenic profile: -:-:-
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14 Predicted serotype(s): N/A (The predicted antigenic profile does not exist in the White-Kauffmann-Le Minor scheme)
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16 check fastq id and make them in accordance with each other...please wait...
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20 Result:
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23 None
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24 Thu Oct 12 17:06:43 2017