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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="pysam" version="0.7.7">
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5
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4 <repository changeset_revision="240d1ad9f207" name="package_pysam_0_7_7" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6
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7 <package name="flaimapper" version="1.1.0">
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8 <install version="1.0">
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9 <actions>
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5
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10 <action type="shell_command">git clone --recursive https://github.com/yhoogstrate/flaimapper.git ; cd flaimapper ; git reset --hard "109a7ee13cfad6eb4746422a5382a928e141d0a1" ; cd src ; python setup.py build</action><!-- 109a7ee13cfad6eb4746422a5382a928e141d0a1 should be the latest 1.1.0 commit -->
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11 <action type="make_directory">$INSTALL_DIR/lib/python</action>
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12 <action type="make_directory">$INSTALL_DIR/lib64/python</action>
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13 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python && python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin</action>
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14
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15 <action type="set_environment">
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16 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python</environment_variable>
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17 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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18 </action>
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19 </actions>
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20 </install>
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21 </package>
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22 </tool_dependency>
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