Mercurial > repos > yhoogstrate > flaimapper
comparison tool_dependencies.xml @ 5:059d62372e38 draft
Uploaded
author | yhoogstrate |
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date | Fri, 07 Nov 2014 10:35:15 -0500 |
parents | fec346894871 |
children | 23511bb75535 |
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4:b0b15ff831bf | 5:059d62372e38 |
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1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
2 <tool_dependency> | 2 <tool_dependency> |
3 <package name="pysam" version="0.7.7"> | 3 <package name="pysam" version="0.7.7"> |
4 <repository changeset_revision="240d1ad9f207" name="package_pysam_0_7_7" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" /> | 4 <repository changeset_revision="240d1ad9f207" name="package_pysam_0_7_7" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu" /> |
5 </package> | 5 </package> |
6 | 6 |
7 <package name="flaimapper" version="1.1.0"> | 7 <package name="flaimapper" version="1.1.0"> |
8 <install version="1.0"> | 8 <install version="1.0"> |
9 <actions> | 9 <actions> |
10 <action type="shell_command">git clone --recursive https://github.com/yhoogstrate/flaimapper.git ; git reset --hard "109a7ee13cfad6eb4746422a5382a928e141d0a1" ; cd flaimapper/src ; python setup.py build </action><!-- 109a7ee13cfad6eb4746422a5382a928e141d0a1 should be the latest 1.1.0 commit --> | 10 <action type="shell_command">git clone --recursive https://github.com/yhoogstrate/flaimapper.git ; cd flaimapper ; git reset --hard "109a7ee13cfad6eb4746422a5382a928e141d0a1" ; cd src ; python setup.py build</action><!-- 109a7ee13cfad6eb4746422a5382a928e141d0a1 should be the latest 1.1.0 commit --> |
11 <action type="make_directory">$INSTALL_DIR/lib/python</action> | 11 <action type="make_directory">$INSTALL_DIR/lib/python</action> |
12 <action type="make_directory">$INSTALL_DIR/lib64/python</action> | 12 <action type="make_directory">$INSTALL_DIR/lib64/python</action> |
13 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python && python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin</action> | 13 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python && python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin</action> |
14 | 14 |
15 <action type="set_environment"> | 15 <action type="set_environment"> |