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annotate tool_dependencies.xml @ 71:b724e559907e draft

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planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 92e6dc28cbc0253b964b2cf594320042d8cd9524-dirty
author yating-l
date Wed, 27 Sep 2017 11:15:44 -0400
parents 4ca7cbf2d9b8
children 9f875c8bbb26
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3e0c61b52a06 planemo upload for repository https://github.com/Yating-L/hub-archive-creator commit a77635b40ebd29baafb3bea57f8cbfb3f252e3b0-dirty
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <!-- Useful for HAC are:
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4 - twoBitInfo
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5 - sort
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6 - bedToBigBed
3e0c61b52a06 planemo upload for repository https://github.com/Yating-L/hub-archive-creator commit a77635b40ebd29baafb3bea57f8cbfb3f252e3b0-dirty
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7 - gff3ToGenePred
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8 - gtfToGenePred
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9 - genePredToBed
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10 - genePredToBigGenePred
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11 - faToTwoBit
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12 - samtools
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13 - pslToBigPsl
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14 -->
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15 <package name="samtools" version="1.2">
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16 <repository changeset_revision="5b7172f9b230" name="package_samtools_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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17 </package>
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18 <package name="ucsc_hac" version="340">
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19 <repository changeset_revision="4779f4d34db6" name="package_ucsc_hac_340" owner="yating-l" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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20 </package>
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21 <package name="ucsc_bigbed" version="340">
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22 <repository changeset_revision="0a19f1cdbe8d" name="package_ucsc_bigbed_340" owner="yating-l" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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23 </package>
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25 <package name="ucsc_bigwig" version="340">
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26 <repository changeset_revision="60be8cdcf7ef" name="package_ucsc_bigwig_340" owner="yating-l" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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27 </package>
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28
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29 </tool_dependency>