Mercurial > repos > ximgchess > chap_test_20230411

annotate tomo/pipeline_reduce_nexus.yaml @ 96:4b123ebffb06 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit b682c580a95bebc59bc33128973cee4eac8362c7-dirty
author ximgchess
date Wed, 24 May 2023 14:47:49 +0000
parents 3283cbddcc1d
children e7fd2e5b53ba
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
1 pipeline:
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
2
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
3 # Reduce tomography images
96
4b123ebffb06 planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit b682c580a95bebc59bc33128973cee4eac8362c7-dirty
ximgchess
parents: 95
diff changeset
4 - common.MultipleReader:
4b123ebffb06 planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit b682c580a95bebc59bc33128973cee4eac8362c7-dirty
ximgchess
parents: 95
diff changeset
5 readers:
4b123ebffb06 planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit b682c580a95bebc59bc33128973cee4eac8362c7-dirty
ximgchess
parents: 95
diff changeset
6 - NexusReader:
1
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
7 filename: setup.nex
96
4b123ebffb06 planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit b682c580a95bebc59bc33128973cee4eac8362c7-dirty
ximgchess
parents: 95
diff changeset
8 - YAMLReader:
1
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
9 filename: reduce.yaml
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
10 schema: TomoReduceConfig
62
2679014bb6eb planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit e280dd942513f966a9a61a3af68ee7972fb8992f-dirty
ximgchess
parents: 1
diff changeset
11 - tomo.TomoDataProcessor:
2679014bb6eb planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit e280dd942513f966a9a61a3af68ee7972fb8992f-dirty
ximgchess
parents: 1
diff changeset
12 output_folder: tomo_reduce_plots
2679014bb6eb planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit e280dd942513f966a9a61a3af68ee7972fb8992f-dirty
ximgchess
parents: 1
diff changeset
13 save_figs: 'only'
1
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
14 - common.NexusWriter:
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
15 filename: output.nex
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
16 force_overwrite: true