Mercurial > repos > ximgchess > chap_test_20230411

annotate tomo/pipeline_reduce_nexus.yaml @ 95:3283cbddcc1d draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 01388c69776c82e48e84676a3d17d4623f5e08bd-dirty
author ximgchess
date Wed, 24 May 2023 14:46:50 +0000
parents c63315c31cef
children 4b123ebffb06
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
1 pipeline:
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
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84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
3 # Reduce tomography images
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3283cbddcc1d planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 01388c69776c82e48e84676a3d17d4623f5e08bd-dirty
ximgchess
parents: 93
diff changeset
4 - pipeline.MultiplePipelineItem:
3283cbddcc1d planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 01388c69776c82e48e84676a3d17d4623f5e08bd-dirty
ximgchess
parents: 93
diff changeset
5 items:
3283cbddcc1d planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 01388c69776c82e48e84676a3d17d4623f5e08bd-dirty
ximgchess
parents: 93
diff changeset
6 - common.NexusReader:
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84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
7 filename: setup.nex
95
3283cbddcc1d planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 01388c69776c82e48e84676a3d17d4623f5e08bd-dirty
ximgchess
parents: 93
diff changeset
8 - common.YAMLReader:
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84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
9 filename: reduce.yaml
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
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10 schema: TomoReduceConfig
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2679014bb6eb planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit e280dd942513f966a9a61a3af68ee7972fb8992f-dirty
ximgchess
parents: 1
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11 - tomo.TomoDataProcessor:
2679014bb6eb planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit e280dd942513f966a9a61a3af68ee7972fb8992f-dirty
ximgchess
parents: 1
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12 output_folder: tomo_reduce_plots
2679014bb6eb planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit e280dd942513f966a9a61a3af68ee7972fb8992f-dirty
ximgchess
parents: 1
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13 save_figs: 'only'
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84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
14 - common.NexusWriter:
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
15 filename: output.nex
84a215623d9e planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
ximgchess
parents:
diff changeset
16 force_overwrite: true