Mercurial > repos > ximgchess > chap_test_20230411

diff tomo/pipeline_reduce_nexus.yaml @ 1:84a215623d9e draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit f4980be19456f3f51758e06e2eb7520924ce1e3a
author ximgchess
date Tue, 11 Apr 2023 15:49:53 +0000
parents
children 2679014bb6eb
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tomo/pipeline_reduce_nexus.yaml	Tue Apr 11 15:49:53 2023 +0000
@@ -0,0 +1,14 @@
+pipeline:
+
+  # Reduce tomography images
+  - common.MultipleReader:
+      readers:
+        - NexusReader:
+            filename: setup.nex
+        - YAMLReader:
+            filename: reduce.yaml
+            schema: TomoReduceConfig
+  - tomo.TomoDataProcessor
+  - common.NexusWriter:
+      filename: output.nex
+      force_overwrite: true