Mercurial > repos > ximgchess > chap_test_20230411

view tomo/pipeline_reduce_nexus.yaml @ 62:2679014bb6eb draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit e280dd942513f966a9a61a3af68ee7972fb8992f-dirty
author ximgchess
date Thu, 13 Apr 2023 12:40:41 +0000
parents 84a215623d9e
children 72608a06dd7f
line wrap: on
line source

pipeline:

  # Reduce tomography images
  - common.MultipleReader:
      readers:
        - NexusReader:
            filename: setup.nex
        - YAMLReader:
            filename: reduce.yaml
            schema: TomoReduceConfig
  - tomo.TomoDataProcessor:
      output_folder: tomo_reduce_plots
      save_figs: 'only'
  - common.NexusWriter:
      filename: output.nex
      force_overwrite: true