changeset 47:fb13fae2c873 draft

adding a print statement.
author trinity_ctat
date Thu, 25 Oct 2018 21:18:27 -0400
parents f4f48007db67
children d4b5258f244b
files data_manager/add_ctat_resource_lib.py
diffstat 1 files changed, 1 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/add_ctat_resource_lib.py	Thu Oct 25 20:55:44 2018 -0400
+++ b/data_manager/add_ctat_resource_lib.py	Thu Oct 25 21:18:27 2018 -0400
@@ -729,6 +729,7 @@
             os.remove(gmap_success_full_file_path)
         command = "gmap_build -D {:s}/ -d ref_genome.fa.gmap -k 13 {:s}/ref_genome.fa 2>&1".format( \
         	   genome_build_directory, genome_build_directory)
+        print "Doing a gmap_build with the following command:\n\t{:s}\n".format(command)
         try: # to send the gmap_build command.
             subprocess.check_call(command, shell=True)
         except subprocess.CalledProcessError: