Mercurial > repos > stef > package_qdnaseq_1_0_5
changeset 1:3fcdbbc43d62 draft
Uploaded
| author | stef |
|---|---|
| date | Thu, 19 Jun 2014 06:02:41 -0400 |
| parents | ce31fec9c3d5 |
| children | 42096296e06f |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 17 insertions(+), 17 deletions(-) [+] |
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--- a/tool_dependencies.xml Thu Jun 19 06:00:14 2014 -0400 +++ b/tool_dependencies.xml Thu Jun 19 06:02:41 2014 -0400 @@ -1,20 +1,20 @@ <?xml version="1.0"?> <tool_dependency> <!-- - <package name="R" version="3.1.0"> - <repository name="package_r_3_1_0" owner="" prior_installation_required="True" /> - </package> - <package name="qdnaseq" version="1.0.5"> - <install version="1.0"> - <actions> + <package name="R" version="3.1.0"> + <repository name="package_r_3_1_0" owner="" prior_installation_required="True" /> + </package> + <package name="qdnaseq" version="1.0.5"> + <install version="1.0"> + <actions> <action type="shell_command">echo "[DEBUG] ..."</action> - <action type="setup_r_environment"> + <action type="setup_r_environment"> - <repository name="package_r_3_1_0" owner=""> - <package name="R" version="3.1.0" /> - </repository> - - <package>http://path/to/R.methodsS3_1.6.1.tar.gz</package> + <repository name="package_r_3_1_0" owner=""> + <package name="R" version="3.1.0" /> + </repository> + + <package>http://path/to/R.methodsS3_1.6.1.tar.gz</package> <package>http://path/to/matrixStats_0.10.0.tar.gz</package> <package>http://path/to/R.oo_1.18.0.tar.gz</package> <package>http://path/to/R.utils_1.32.4.tar.gz</package> @@ -38,12 +38,12 @@ <package>http://path/to/Rsamtools_1.16.1.tar.gz</package> <package>http://path/to/QDNAseq_1.0.5.tar.gz</package> - </action> - </actions> - </install> - <readme> + </action> + </actions> + </install> + <readme> Prepares R Bioconductor package "QDNAseq" and all of its dependencies. </readme> - </package> + </package> --> </tool_dependency>