view OTUtable_addblast.xml @ 1:4afa63644ac3 draft default tip

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<tool id="mothur-otu-addblast" name="Mothur OTUtable addBLAST" version="1">

	<description>for EMC workflow</description> 

	<command interpreter="python">
		OTUtable_addblast.py $otufile $blastfile $oturepfile
	</command>

	<inputs>
            <param name="otufile" type="data" label="Select OTU table (taxonomy output from MOTHUR Classify.otu)" help="choose input file from history"/>
            <param name="blastfile" type="data" label="Select BLAST output" help="choose input file from history"/>
            <param name="oturepfile" type="data" label="Select OTU representatives fasta file" help="choose input file from history"/>            
	</inputs>
	
	<outputs>
		<data format="txt" name="outputfile" from_work_dir="newtable2.tsv" label="OTU table with BLAST on ${on_string}"/>
	</outputs>

	<help>
		description of tool for the users
	</help>
</tool>