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diff OTUtable_addblast.xml @ 1:4afa63644ac3 draft default tip

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author saskia-hiltemann
date Mon, 09 Nov 2015 09:50:15 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/OTUtable_addblast.xml	Mon Nov 09 09:50:15 2015 -0500
@@ -0,0 +1,22 @@
+<tool id="mothur-otu-addblast" name="Mothur OTUtable addBLAST" version="1">
+
+	<description>for EMC workflow</description> 
+
+	<command interpreter="python">
+		OTUtable_addblast.py $otufile $blastfile $oturepfile
+	</command>
+
+	<inputs>
+            <param name="otufile" type="data" label="Select OTU table (taxonomy output from MOTHUR Classify.otu)" help="choose input file from history"/>
+            <param name="blastfile" type="data" label="Select BLAST output" help="choose input file from history"/>
+            <param name="oturepfile" type="data" label="Select OTU representatives fasta file" help="choose input file from history"/>            
+	</inputs>
+	
+	<outputs>
+		<data format="txt" name="outputfile" from_work_dir="newtable2.tsv" label="OTU table with BLAST on ${on_string}"/>
+	</outputs>
+
+	<help>
+		description of tool for the users
+	</help>
+</tool>
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