comparison fastq-join.xml @ 1:6dd8062546e8 default tip

fixed xmls
author nilesh
date Mon, 15 Jul 2013 21:50:45 -0500
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0:ae2ef1b65c47 1:6dd8062546e8
1 <tool id="fast-join" name="fastq join">
2 <description>Fastq-join: merge overlapping parked end reads</description>
3 <requirements>
4 <requirement type="package" version="1.2.8">zlib</requirement>
5 <requirement type="package" version="0.7.5a">bwa</requirement>
6 </requirements>
7 <command interpreter="python">
8 fastq-join $input1 $input2 -o $output1 -o $output2 -o $output3
9
10 </command>
11
12 <inputs>
13
14 <param name="input1" type="data" format="fastq" label="Source file 1"/>
15 <param name="input2" type="data" format="fastq" label="Source file 2"/>
16 </inputs>
17
18 <outputs>
19 <data format="txt" name="output1" label="output file un1"/>
20 <data format="txt" name="output2" label="output file un2"/>
21 <data format="txt" name="output3" label="output file join"/>
22
23 </outputs>
24
25 <help>
26 This tool computes GC content from a FASTA file.
27 </help>
28
29 </tool>