Mercurial > repos > nick > allele_counts_1
changeset 7:34892857567b
Ready for release - script
author | nick |
---|---|
date | Mon, 03 Jun 2013 23:49:47 -0400 |
parents | f6d9742c1da0 |
children | 4faea727a72c |
files | allele-counts.py |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
line wrap: on
line diff
--- a/allele-counts.py Thu May 30 13:49:37 2013 -0400 +++ b/allele-counts.py Mon Jun 03 23:49:47 2013 -0400 @@ -202,7 +202,7 @@ try: variant_counts[variant] = int(float(reads)) except ValueError, e: - continue + fail("Error in input VCF: Variant count not a valid number. Failed on variant count string '"+reads+"'\nIn the following line:\n"+line) sample_counts[sample_names[i]] = variant_counts