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changeset 9:312cb1b2d3cd draft

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Uploaded
author mzeidler
date Tue, 24 Sep 2013 14:22:46 -0400
parents 4cc84d6a7b21
children d042cf2f4043
files fasta_to_star_index_converter.xml
diffstat 1 files changed, 1 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/fasta_to_star_index_converter.xml	Tue Sep 24 14:22:32 2013 -0400
+++ b/fasta_to_star_index_converter.xml	Tue Sep 24 14:22:46 2013 -0400
@@ -4,9 +4,7 @@
         <requirement type="package" version="2.3.0">STAR</requirement>
         <requirement type="package" version="0.1.19">samtools</requirement>
         <requirement type="package" version="1.0">virana_python</requirement>
-        <requirement type="package" version="1.7.1">numpy</requirement>
-        <requirement type="package" version="1.61">biopython</requirement>
-        <requirement type="package" version="0.5.4">htseq</requirement>
+
     </requirements>
     <command interpreter="python">vmap_rnaindex.py --html_file $output --dir ${output.files_path} --index_dir ${output.files_path} --reference_file $input 2&gt;&amp;1 </command>