# HG changeset patch
# User mzeidler
# Date 1380046966 14400
# Node ID 312cb1b2d3cd734b8cc61593d3fa8a28e0d9ae4b
# Parent  4cc84d6a7b211f1eec40155a7b6461ac3a42c339
Uploaded

diff -r 4cc84d6a7b21 -r 312cb1b2d3cd fasta_to_star_index_converter.xml
--- a/fasta_to_star_index_converter.xml	Tue Sep 24 14:22:32 2013 -0400
+++ b/fasta_to_star_index_converter.xml	Tue Sep 24 14:22:46 2013 -0400
@@ -4,9 +4,7 @@
         <requirement type="package" version="2.3.0">STAR</requirement>
         <requirement type="package" version="0.1.19">samtools</requirement>
         <requirement type="package" version="1.0">virana_python</requirement>
-        <requirement type="package" version="1.7.1">numpy</requirement>
-        <requirement type="package" version="1.61">biopython</requirement>
-        <requirement type="package" version="0.5.4">htseq</requirement>
+
     </requirements>
     <command interpreter="python">vmap_rnaindex.py --html_file $output --dir ${output.files_path} --index_dir ${output.files_path} --reference_file $input 2&gt;&amp;1 </command>