Mercurial > repos > mzeidler > virana2
changeset 6:226228ac32a2 draft
Uploaded
author | mzeidler |
---|---|
date | Tue, 24 Sep 2013 13:54:35 -0400 |
parents | 4f6e349dfc17 |
children | 36a847fdcc49 |
files | tool_dependencies.xml |
diffstat | 1 files changed, 1 insertions(+), 51 deletions(-) [+] |
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--- a/tool_dependencies.xml Tue Sep 24 13:29:20 2013 -0400 +++ b/tool_dependencies.xml Tue Sep 24 13:54:35 2013 -0400 @@ -22,62 +22,12 @@ </actions> </install> </package> - <package name="freetype" version="2.4.11"> - <install version="1.0"> - <actions> - <action type="download_by_url">http://downloads.sourceforge.net/project/freetype/freetype2/2.4.11/freetype-2.4.11.tar.bz2</action> - <action type="shell_command">./configure --prefix=$INSTALL_DIR/freetype/</action> - <action type="shell_command">make</action> - <action type="shell_command">make install</action> - <action type="set_environment"> - <environment_variable name="PATH" action="append_to">$INSTALL_DIR/freetype/bin/</environment_variable> - <environment_variable name="FREETYPE_LIB_DIR" action="set_to">$INSTALL_DIR/freetype/lib/</environment_variable> - <environment_variable name="FREETYPE_INCLUDE_DIR" action="set_to">$INSTALL_DIR/freetype/include/</environment_variable> - </action> - </actions> - </install> - <readme>Compiling freetype requires a C compiler (typically gcc).</readme> - </package> - -<package name="matplotlib" version="1.3.0"> - <install version="1.0"> - <actions> - <!-- first action is always downloading --> - <action type="download_by_url">http://downloads.sourceforge.net/project/matplotlib/matplotlib/matplotlib-1.3.0/matplotlib-1.3.0.tar.gz</action> - - - <!-- install matplotlib --> - <action type="make_directory">$INSTALL_DIR/lib/python</action> - <action type="shell_command">echo "### PYTHONPATH = $PYTHONPATH, PYTHONPATH_NUMPY = $PYTHONPATH_NUMPY"</action> - <action type="shell_command">export PYTHONPATH=$INSTALL_DIR/lib/python:$PYTHONPATH_NUMPY:$PYTHONPATH && - export CPLUS_INCLUDE_PATH=$FREETYPE_INCLUDE_DIR:$FREETYPE_INCLUDE_DIR/freetype2/:$CPLUS_INCLUDE_PATH && - export LIBRARY_PATH=$FREETYPE_LIB_DIR:$LIBRARY_PATH && - python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin</action> - <action type="set_environment"> - <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> - <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable> - <environment_variable action="set_to" name="PYTHONPATH_MATPLOTLIB">$INSTALL_DIR/lib/python</environment_variable> - </action> - </actions> - </install> - <readme>Compiling matplotlib requires a C compiler (typically gcc) and libpng.</readme> - </package> <package name="biopython" version="1.61"> <install version="1.0"> <actions> <action type="download_by_url">https://pypi.python.org/packages/source/b/biopython/biopython-1.61.tar.gz</action> - <action type="make_directory">$INSTALL_DIR/lib/python</action> <action type="shell_command"> - export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && - export PATH=$PATH:$PATH_NUMPY && - export PYTHONPATH=$PYTHONPATH:$PYTHONPATH_NUMPY && - python setup.py install --install-lib $INSTALL_DIR/lib/python - </action> - <action type="set_environment"> - <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> - <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable> - <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable> - <environment_variable action="set_to" name="PYTHONPATH_BIOPYTHON">$INSTALL_DIR/lib/python</environment_variable> + python setup.py install --user </action> </actions> </install>