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<?xml version="1.0"?>
<tool_dependency>
  <package name="libpng" version="1.6.7">
    <repository changeset_revision="84b368168be8" name="package_libpng_1_6_7" owner="morinlab" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>
  <package name="openssl" version="1.0.1">
    <repository changeset_revision="33d1f4d7930c" name="package_openssl_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>
  <package name="mysql" version="6.1.0">
    <repository changeset_revision="766f27cb3cd7" name="package_mysql_6_1_0" owner="morinlab" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>
  <package name="ucsc_user_apps" version="310">
    <install version="1.0">
      <actions>
        <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/userApps.v310.src.tgz</action>
        <action type="set_environment_for_install">
          <repository changeset_revision="33d1f4d7930c" name="package_openssl_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
            <package name="openssl" version="1.0.1" />
          </repository>
          <repository changeset_revision="84b368168be8" name="package_libpng_1_6_7" owner="morinlab" toolshed="https://testtoolshed.g2.bx.psu.edu">
            <package name="libpng" version="1.6.7" />
          </repository>
          <repository changeset_revision="766f27cb3cd7" name="package_mysql_6_1_0" owner="morinlab" toolshed="https://testtoolshed.g2.bx.psu.edu">
            <package name="mysql" version="6.1.0" />
          </repository>
        </action>
        <action type="shell_command">echo $PATH &gt; ~/tmp.env.txt</action>
        <action type="shell_command">make</action>
        <action type="move_directory_files">
          <source_directory>./bin</source_directory>
          <destination_directory>$INSTALL_DIR/bin</destination_directory>
        </action>
        <action type="set_environment">
          <environment_variable action="set_to" name="UCSCUSERAPPS">$INSTALL_DIR</environment_variable>
          <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
        </action>
      </actions>
    </install>
    <readme>
      UCSC User Apps may take a moment for installation as it builds all utililities.
      Post installation, all tools will be available as command line executables.
    </readme>
  </package>
</tool_dependency>