Mercurial > repos > morinlab > package_ucsc_user_apps_310
comparison tool_dependencies.xml @ 0:7d0e49dc20c2 draft default tip
Uploaded
| author | morinlab |
|---|---|
| date | Sun, 04 Dec 2016 19:08:54 -0500 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:7d0e49dc20c2 |
|---|---|
| 1 <?xml version="1.0"?> | |
| 2 <tool_dependency> | |
| 3 <package name="libpng" version="1.6.7"> | |
| 4 <repository changeset_revision="84b368168be8" name="package_libpng_1_6_7" owner="morinlab" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | |
| 5 </package> | |
| 6 <package name="openssl" version="1.0.1"> | |
| 7 <repository changeset_revision="33d1f4d7930c" name="package_openssl_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | |
| 8 </package> | |
| 9 <package name="mysql" version="6.1.0"> | |
| 10 <repository changeset_revision="766f27cb3cd7" name="package_mysql_6_1_0" owner="morinlab" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | |
| 11 </package> | |
| 12 <package name="ucsc_user_apps" version="310"> | |
| 13 <install version="1.0"> | |
| 14 <actions> | |
| 15 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/userApps.v310.src.tgz</action> | |
| 16 <action type="set_environment_for_install"> | |
| 17 <repository changeset_revision="33d1f4d7930c" name="package_openssl_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> | |
| 18 <package name="openssl" version="1.0.1" /> | |
| 19 </repository> | |
| 20 <repository changeset_revision="84b368168be8" name="package_libpng_1_6_7" owner="morinlab" toolshed="https://testtoolshed.g2.bx.psu.edu"> | |
| 21 <package name="libpng" version="1.6.7" /> | |
| 22 </repository> | |
| 23 <repository changeset_revision="766f27cb3cd7" name="package_mysql_6_1_0" owner="morinlab" toolshed="https://testtoolshed.g2.bx.psu.edu"> | |
| 24 <package name="mysql" version="6.1.0" /> | |
| 25 </repository> | |
| 26 </action> | |
| 27 <action type="shell_command">echo $PATH > ~/tmp.env.txt</action> | |
| 28 <action type="shell_command">make</action> | |
| 29 <action type="move_directory_files"> | |
| 30 <source_directory>./bin</source_directory> | |
| 31 <destination_directory>$INSTALL_DIR/bin</destination_directory> | |
| 32 </action> | |
| 33 <action type="set_environment"> | |
| 34 <environment_variable action="set_to" name="UCSCUSERAPPS">$INSTALL_DIR</environment_variable> | |
| 35 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> | |
| 36 </action> | |
| 37 </actions> | |
| 38 </install> | |
| 39 <readme> | |
| 40 UCSC User Apps may take a moment for installation as it builds all utililities. | |
| 41 Post installation, all tools will be available as command line executables. | |
| 42 </readme> | |
| 43 </package> | |
| 44 </tool_dependency> |
