Mercurial > repos > messersc > jamm
diff readme @ 1:243f75d0ed6e draft default tip
Uploaded.
Includes new release 1.0.7 with fixed optional controls.
author | messersc |
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date | Thu, 19 Feb 2015 05:39:45 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/readme Thu Feb 19 05:39:45 2015 -0500 @@ -0,0 +1,21 @@ +JAMM is a universal peak finder for NGS datasets that can integrate information from biological replicates. + +JAMM was developed in the Ohler lab at the Berlin Institute for Medical Systems Biology. + + +Visit this page for documentation: http://code.google.com/p/jamm-peak-finder/ + + +To install JAMM: +- Make sure you are on a Linux system +- Make sure you have R and Perl installed +- Install the following R packages: sqldf, signal, mclust + + +To get information about options available to JAMM users, run the JAMM bash script without any parameters. + + +If you encounter errors or have questions, please email mahmoud.ibrahim@mdc-berlin.de or post at the JAMM Google groups page: https://groups.google.com/forum/#!forum/jamm-peak-finder + + +Thank you.