Mercurial > repos > messersc > jamm
comparison readme @ 1:243f75d0ed6e draft default tip
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Includes new release 1.0.7 with fixed optional controls.
author | messersc |
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date | Thu, 19 Feb 2015 05:39:45 -0500 |
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1 JAMM is a universal peak finder for NGS datasets that can integrate information from biological replicates. | |
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3 JAMM was developed in the Ohler lab at the Berlin Institute for Medical Systems Biology. | |
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6 Visit this page for documentation: http://code.google.com/p/jamm-peak-finder/ | |
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9 To install JAMM: | |
10 - Make sure you are on a Linux system | |
11 - Make sure you have R and Perl installed | |
12 - Install the following R packages: sqldf, signal, mclust | |
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15 To get information about options available to JAMM users, run the JAMM bash script without any parameters. | |
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18 If you encounter errors or have questions, please email mahmoud.ibrahim@mdc-berlin.de or post at the JAMM Google groups page: https://groups.google.com/forum/#!forum/jamm-peak-finder | |
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21 Thank you. |