Mercurial > repos > melissacline > ucsc_xena_platform
changeset 24:975abd814626
Uploaded, to try to fix a merge problem.
| author | melissacline |
|---|---|
| date | Tue, 02 Jun 2015 19:17:14 -0400 |
| parents | 7c49d9f8687a |
| children | 8669770eb1cc |
| files | ucsc_xena_datapages.xml |
| diffstat | 1 files changed, 24 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/ucsc_xena_datapages.xml Tue Jun 02 19:17:14 2015 -0400 @@ -0,0 +1,24 @@ +<?xml version="1.0"?> +<!-- + If the value of 'URL_method' is 'get', the request will consist of the value of 'URL' coming back in + the initial response. If value of 'URL_method' is 'post', any additional params coming back in the + initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed. +--> +<tool name="Explore Data in Xena" id="ucsc_xenadatapages" tool_type="data_source"> + <description>Browse the UCSC Xena Data Pages.</description> + <command interpreter="python">ucsc_xena_download.py $genomic $__app__.config.output_size_limit</command> + <inputs action="https://genome-cancer.soe.ucsc.edu/proj/site/xena/datapages/" check_values="false" method="get"> + <display>Explore the data in Xena $GALAXY_URL</display> + <param name="GALAXY_URL" type="baseurl" value="/tool_runner" /> + <param name="tool_id" type="hidden" value="ucsc_xenadatapages" /> + </inputs> + <request_param_translation> + <request_param galaxy_name="URL_method" remote_name="URL_method" missing="get" /> + <request_param galaxy_name="URL" remote_name="URL" missing="" /> + </request_param_translation> + <uihints minwidth="800"/> + <outputs> + <data name="genomic" format="tabular" label="#echo $URL.rsplit('/',1)[1].rsplit('.',1)[0]+' genomic'" /> + </outputs> + <options sanitize="False" refresh="True"/> +</tool>