Mercurial > repos > matt-shirley > sra_tools
changeset 33:9ad900168ded draft
typo in input conditional
author | Matt Shirley <mdshw5@gmail.com> |
---|---|
date | Sun, 30 Jun 2013 16:18:09 -0400 |
parents | a7d8d22f9ad2 |
children | 7803126704c6 |
files | fastq_dump.xml |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/fastq_dump.xml Sun Jun 30 11:27:51 2013 -0400 +++ b/fastq_dump.xml Sun Jun 30 16:18:09 2013 -0400 @@ -2,7 +2,7 @@ <description> format reads from NCBI sra.</description> <command> #if $input.input_select=="file" - fastq-dump --log-level fatal --accession '${input.sra.name}' --stdout $split $aligned $input.file > $output + fastq-dump --log-level fatal --accession '${input.file.name}' --stdout $split $aligned $input.file > $output #else fastq-dump --log-level fatal $input.accession > $output #end if