Mercurial > repos > jeremyjliu > region_motif_enrichment
view Galaxy-Workflow-Region_Motif_Count_Comparison_Combined_Motifs.ga @ 29:c78ebf00379d draft
Add Refinery workflows
author | jeremyjliu |
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date | Mon, 05 Jan 2015 22:22:08 -0500 |
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{ "a_galaxy_workflow": "true", "annotation": "{\n \"refinery_type\": \"analysis\",\n \"refinery_relationships\": [\n {\n \"category\": \"1-1\",\n \"set1\": \"Region 1\",\n \"set2\": \"Region 2\"\n }\n ]\n}", "format-version": "0.1", "name": "Region Motif Count Comparison Combined Motifs", "steps": { "0": { "annotation": "", "id": 0, "input_connections": {}, "inputs": [ { "description": "", "name": "Region 1" } ], "name": "Input dataset", "outputs": [], "position": { "left": 153.73957872390747, "top": 193.73959398269653 }, "tool_errors": null, "tool_id": null, "tool_state": "{\"name\": \"Region 1\"}", "tool_version": null, "type": "data_input", "user_outputs": [] }, "1": { "annotation": "", "id": 1, "input_connections": {}, "inputs": [ { "description": "", "name": "Region 2" } ], "name": "Input dataset", "outputs": [], "position": { "left": 158.68751573562622, "top": 417.69794511795044 }, "tool_errors": null, "tool_id": null, "tool_state": "{\"name\": \"Region 2\"}", "tool_version": 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"output_name": "out_tab" } }, "inputs": [], "name": "Concatenate datasets", "outputs": [ { "name": "out_file1", "type": "input" } ], "position": { "left": 654.4687962532043, "top": 410.99655961990356 }, "post_job_actions": {}, "tool_errors": null, "tool_id": "cat1", "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"input1\": \"null\", \"queries\": \"[{\\\"input2\\\": null, \\\"__index__\\\": 0}]\"}", "tool_version": "1.0.0", "type": "tool", "user_outputs": [] }, "8": { "annotation": "{\n \"out_enriched\": {\n \"name\": \"motifs_enriched\",\n \"description\": \"Motifs enriched in regions 1 versus regions 2.\",\n \"type\": \"tabular\"\n },\n \"out_depleted\": {\n \"name\": \"motifs_depleted\",\n \"description\": \"Motifs depleted in regions 1 versus regions 2.\",\n \"type\": \"tabular\"\n },\n \"out_plots\": {\n \"name\": \"motif_counts_plots\",\n \"description\": \"Summary plots for motifs in regions 1 versus regions 2.\",\n \"type\": \"png\"\n }\n}", "id": 8, 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