Mercurial > repos > jeremyjliu > region_motif_enrichment

diff Galaxy-Workflow-Region_Motif_Count_Comparison_Combined_Motifs.ga @ 29:c78ebf00379d draft

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Add Refinery workflows
author jeremyjliu
date Mon, 05 Jan 2015 22:22:08 -0500
parents
children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/Galaxy-Workflow-Region_Motif_Count_Comparison_Combined_Motifs.ga	Mon Jan 05 22:22:08 2015 -0500
@@ -0,0 +1,277 @@
+{
+    "a_galaxy_workflow": "true", 
+    "annotation": "{\n        \"refinery_type\": \"analysis\",\n        \"refinery_relationships\": [\n                {\n                        \"category\": \"1-1\",\n                        \"set1\": \"Region 1\",\n                        \"set2\": \"Region 2\"\n                }\n        ]\n}", 
+    "format-version": "0.1", 
+    "name": "Region Motif Count Comparison Combined Motifs", 
+    "steps": {
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+            "id": 0, 
+            "input_connections": {}, 
+            "inputs": [
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+                    "name": "Region 1"
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+            "type": "data_input", 
+            "user_outputs": []
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+            "id": 1, 
+            "input_connections": {}, 
+            "inputs": [
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+                    "output_name": "output"
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+            "inputs": [], 
+            "name": "Region Motif Intersect", 
+            "outputs": [
+                {
+                    "name": "out_tab", 
+                    "type": "tabular"
+                }
+            ], 
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+                    "id": 3, 
+                    "output_name": "out_tab"
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+            }, 
+            "inputs": [], 
+            "name": "Concatenate datasets", 
+            "outputs": [
+                {
+                    "name": "out_file1", 
+                    "type": "input"
+                }
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+                    "type": "input"
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+            "id": 8, 
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+                    "output_name": "out_file1"
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+            }, 
+            "inputs": [], 
+            "name": "Region Motif Count Compare", 
+            "outputs": [
+                {
+                    "name": "out_enriched", 
+                    "type": "tabular"
+                }, 
+                {
+                    "name": "out_depleted", 
+                    "type": "tabular"
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+                {
+                    "name": "out_plots", 
+                    "type": "png"
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+}
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