Mercurial > repos > jeremie > package_pindel_0_2_5
changeset 3:e201ecde3bcb draft
Uploaded
author | jeremie |
---|---|
date | Wed, 02 Jul 2014 05:58:55 -0400 |
parents | 2e7e0d92cb40 |
children | bced102b82f7 |
files | tool_dependencies.xml |
diffstat | 1 files changed, 13 insertions(+), 6 deletions(-) [+] |
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--- a/tool_dependencies.xml Wed Jul 02 05:50:46 2014 -0400 +++ b/tool_dependencies.xml Wed Jul 02 05:58:55 2014 -0400 @@ -19,18 +19,25 @@ $INSTALL_DIR $BAM_ROOT" </action> --> - <action type="move_file"> - <source>$BAM_ROOT/bin</source> - <destination>./samtools</destination> + <action type="shell_command"> + cp -r $BAM_ROOT/bin samtools + </action> + <action type="shell_command"> + cp -r $BAM_ROOT/lib samtools </action> - <action type="move_file"> + <action type="shell_command"> + cp -r $BAM_ROOT/include/bam samtools + </action> + + <!-- <action type="shell_command"> <source>$BAM_ROOT/lib</source> <destination>./samtools</destination> </action> - <action type="move_directory_files"> + <action type="shell_command"> <source_directory>$BAM_ROOT/include/bam</source_directory> <destination_directory>./samtools</destination_directory> - </action> + </action> --> + <action type="shell_command">./INSTALL ./samtools</action> <action type="move_file">