Mercurial > repos > greg > plant_tribes_assembly_post_processor

changeset 3:06c1462f94e6 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author greg
date Mon, 14 Nov 2016 14:42:33 -0500
parents 2fcd27ee5976
children e5809ed8e0aa
files plant_tribes_assembly_post_processor.xml
diffstat 1 files changed, 1 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/plant_tribes_assembly_post_processor.xml	Mon Nov 14 14:37:05 2016 -0500
+++ b/plant_tribes_assembly_post_processor.xml	Mon Nov 14 14:42:33 2016 -0500
@@ -12,7 +12,6 @@
     </stdio>
     <command>
         <![CDATA[
-            mkdir -p output &&
             AssemblyPostProcesser
             --transcripts "$input1"
             --prediction_method $prediction_method_cond.prediction_method
@@ -89,7 +88,7 @@
     </inputs>
     <outputs>
         <collection name="transcripts" type="list">
-            <discover_datasets pattern="__name__" directory="output" visible="false" />
+            <discover_datasets pattern="__name__" directory="assemblyPostProcessing_dir" visible="false" />
         </collection>
     </outputs>
     <tests>