changeset 6:001551406848 draft

Uploaded
author greg
date Tue, 24 Nov 2015 08:15:48 -0500
parents 2e0ddcc726f9
children d455f14530dc
files cwpair2.py
diffstat 1 files changed, 0 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/cwpair2.py	Tue Nov 24 08:15:40 2015 -0500
+++ b/cwpair2.py	Tue Nov 24 08:15:48 2015 -0500
@@ -27,7 +27,6 @@
     parser.add_argument('--relative_threshold', dest='relative_threshold', type=float, default=0.0, help='Percentage to filter the 95th percentile.')
     parser.add_argument('--absolute_threshold', dest='absolute_threshold', type=float, default=0.0, help='Absolute value to filter.')
     parser.add_argument('--output_files', dest='output_files', default='simple', help='Restrict output dataset collections.')
-    parser.add_argument('--sort_chromosome', dest='sort_chromosome', default='asc', help='Sort output by chromosome.')
     parser.add_argument('--sort_score', dest='sort_score', default='no', help='Sort output by score.')
     parser.add_argument('--statistics_output', dest='statistics_output', help='Statistics output file.')
     args = parser.parse_args()
@@ -50,7 +49,6 @@
                                           args.down_distance,
                                           args.binsize,
                                           args.output_files,
-                                          args.sort_chromosome,
                                           args.sort_score)
         statistics.extend(stats)
     # Accumulate statistics.