Mercurial > repos > greg > cwpair2
changeset 7:d455f14530dc draft
Uploaded
author | greg |
---|---|
date | Tue, 24 Nov 2015 08:15:57 -0500 |
parents | 001551406848 |
children | 1fc26b8e618d |
files | cwpair2.xml |
diffstat | 1 files changed, 0 insertions(+), 7 deletions(-) [+] |
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--- a/cwpair2.xml Tue Nov 24 08:15:48 2015 -0500 +++ b/cwpair2.xml Tue Nov 24 08:15:57 2015 -0500 @@ -22,7 +22,6 @@ --relative_threshold $threshold_format_cond.relative_threshold #end if --output_files $output_files - --sort_chromosome $sort_chromosome --sort_score $sort_score --statistics_output "$statistics_output" ]]> @@ -56,10 +55,6 @@ <option value="simple_orphan_detail">matched pairs, orphans and details only (D,O,S)</option> <option value="all">no restrictions (output everything: C,D,F,O,P,S)</option> </param> - <param name="sort_chromosome" type="select" label="Sort output by chromosomes in" help="Chromosome strings that are not numeric will not be sorted" > - <option value="asc" selected="True">ascending order</option> - <option value="desc">descending order</option> - </param> <param name="sort_score" type="select" label="Sort output by score?"> <option value="no" selected="True">No</option> <option value="asc">Yes, in ascending order</option> @@ -151,7 +146,6 @@ <param name="threshold_format" value="relative_threshold" /> <param name="relative_threshold" value="0.0" /> <param name="output_files" value="simple" /> - <param name="sort_chromosome" value="asc" /> <param name="sort_score" value="asc" /> <output_collection name="closest_S" type="list"> <element name="closest_S_data_1_f0u25d100b1" file="closest_s_output1.gff" ftype="gff" /> @@ -173,7 +167,6 @@ <param name="threshold_format" value="relative_threshold" /> <param name="relative_threshold" value="0.0" /> <param name="output_files" value="all" /> - <param name="sort_chromosome" value="asc" /> <param name="sort_score" value="no" /> <output_collection name="closest_D" type="list"> <element name="closest_D_data_1_f0u50d100b1" file="closest_d_output2.tabular" ftype="tabular" />