Mercurial > repos > fubar > rgrnastar_203e

changeset 24:a711b92d85c1 draft

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Uploaded
author fubar
date Wed, 05 Mar 2014 19:06:51 -0500
parents 64d3abfb8535
children 1903b1fe70fc
files rg_rnaStar.xml tool_dependencies.xml
diffstat 2 files changed, 4 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/rg_rnaStar.xml	Wed Mar 05 18:56:30 2014 -0500
+++ b/rg_rnaStar.xml	Wed Mar 05 19:06:51 2014 -0500
@@ -3,7 +3,6 @@
     <requirements>
         <requirement type="package" version="2.3.1z">rnastar</requirement>
         <requirement type="package" version="0.1.19">samtools</requirement>
-        <requirement type="package" version="2.3.1z">starwrapper</requirement>
     </requirements>
     <command>
     ##
--- a/tool_dependencies.xml	Wed Mar 05 18:56:30 2014 -0500
+++ b/tool_dependencies.xml	Wed Mar 05 19:06:51 2014 -0500
@@ -6,10 +6,10 @@
     <package name="samtools" version="0.1.19">
         <repository changeset_revision="54195f1d4b0f" name="package_samtools_0_1_19" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
     </package>
-    <package name="starwrapper" version="2.3.1z">
-        <readme>
+
+    <readme>
 Installs the STAR wrapper and dependency packages samtools and star - see https://code.google.com/p/rna-star/ 
 STAR is a very fast mapper for rna-seq giving junctions if the indexes are constructed with a junction library
-        </readme>
-    </package>
+    </readme>
+
 </tool_dependency>