Mercurial > repos > fubar > rgrnastar_203e

view tool_dependencies.xml @ 24:a711b92d85c1 draft

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author fubar
date Wed, 05 Mar 2014 19:06:51 -0500
parents 64d3abfb8535
children 1903b1fe70fc
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<?xml version="1.0"?>
<tool_dependency>
    <package name="rnastar" version="2.3.1z">
        <repository changeset_revision="0fa7feb9b4a8" name="package_rnastar_2_3_1z" owner="fubar" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
    </package>
    <package name="samtools" version="0.1.19">
        <repository changeset_revision="54195f1d4b0f" name="package_samtools_0_1_19" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
    </package>

    <readme>
Installs the STAR wrapper and dependency packages samtools and star - see https://code.google.com/p/rna-star/ 
STAR is a very fast mapper for rna-seq giving junctions if the indexes are constructed with a junction library
    </readme>

</tool_dependency>