Mercurial > repos > fubar > rgrnastar_203e

view tool_dependencies.xml @ 25:1903b1fe70fc draft

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author iuc
date Wed, 18 Feb 2015 11:36:41 -0500
parents a711b92d85c1
children 79a6af1a7c79
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<?xml version="1.0"?>
<tool_dependency>
    <package name="rnastar" version="2.4.0d">
        <repository changeset_revision="2ab1b6182b63" name="package_rnastar_240d" owner="fubar" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="samtools" version="0.1.19">
        <repository changeset_revision="8b98841b6b2f" name="package_samtools_0_1_19" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>

    <readme>
Installs the STAR wrapper and dependency packages samtools and star - see https://code.google.com/p/rna-star/ 
STAR is a very fast mapper for rna-seq giving junctions if the indexes are constructed with a junction library
    </readme>

</tool_dependency>