Mercurial > repos > deepakjadmin > caret_tool1
changeset 5:b62469661737 draft
Deleted selected files
| author | deepakjadmin |
|---|---|
| date | Fri, 22 Jan 2016 11:56:16 -0500 |
| parents | dd73689fadf2 |
| children | 62196348ab0a |
| files | tool1V2.xml |
| diffstat | 1 files changed, 0 insertions(+), 39 deletions(-) [+] |
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--- a/tool1V2.xml Fri Jan 22 11:42:28 2016 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,39 +0,0 @@ -<tool id="AdsmkdqaddodfdalV2" name="Prepare input file"> -<description> -This Tool Converts Input csv File into RData Which Is Further Used for Model Building - </description> - <!--command interpreter="bash">step1.sh $file1 $output1 </command--> - <requirements> - <requirement type="set_environment">CARET_TOOL1_PATH</requirement> - <requirement type="set_environment">R_ROOT_DIR</requirement> - <requirement type="package" version="3.2.0">R</requirement> - </requirements> - <command interpreter="Rscript">csv2rdatatrain.R $file1 $RData </command> - <inputs> - <param format="csv" name="file1" type="data" label="Select file containing training data" help="CSV format" /> - </inputs> - <outputs> - <data type="data" format="RData" name="RData" label="Input.RData" /> - </outputs> -<help> -.. class:: infomark - -**Input "csv file" format must be as given below :** - - -"",feature1,feaure2,feature3,..,activity - - -cpd1,623,0.4,3.4,..,Active - -cpd2,234,0.9,5.6,..,Inactive - -cpd3,567,0.5,3.14,..,Active - -cpd4,231,0.1,1.2,..,Inactive - -here "cpd" stands for name or id of a compound. It is rowname with no column header. - - -</help> -</tool>