Mercurial > repos > bgruening > bismark

changeset 3:678f31a13093 draft

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Uploaded
author bgruening
date Fri, 12 Oct 2012 09:29:51 -0400
parents 5226800b84ca
children a4bd52c4ed46
files bismark_wrapper/tool_dependencies.xml
diffstat 1 files changed, 12 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/bismark_wrapper/tool_dependencies.xml	Fri Oct 12 04:17:23 2012 -0400
+++ b/bismark_wrapper/tool_dependencies.xml	Fri Oct 12 09:29:51 2012 -0400
@@ -26,6 +26,18 @@
     <!-- We ship bismark with that wrapper, so we only need to set the PATH variable -->
     <package name="bismark">
         <install version="1.0">
+                <action type="move_file">
+                    <source>bismark</source>
+                    <destination>$INSTALL_DIR/bin</destination>
+                </action>
+                <action type="move_file">
+                    <source>bismark_genome_preparation</source>
+                    <destination>$INSTALL_DIR/bin</destination>
+                </action>
+                <action type="move_file">
+                    <source>bismark_methylation_extractor</source>
+                    <destination>$INSTALL_DIR/bin</destination>
+                </action>
                 <action type="set_environment">
                     <environment_variable name="PATH" action="prepend_to">./</environment_variable>
                 </action>