|
0
|
1 <?xml version="1.0"?>
|
|
|
2 <tool_dependency>
|
|
|
3 <!--<set_environment version="1.0">
|
|
|
4 <environment_variable name="SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable>
|
|
|
5 </set_environment>-->
|
|
|
6 <package name="macs2" version="2.0.10.2">
|
|
|
7 <install version="1.0">
|
|
|
8 <actions>
|
|
3
|
9 <action type="download_by_url">http://ec2-184-72-165-240.compute-1.amazonaws.com/modENCODE_Galaxy/tool_dependencies/macs2/macs2pkg.tar</action>
|
|
0
|
10 <action type="move_directory_files">
|
|
4
|
11 <source>macs2</source>
|
|
|
12 <destination>$INSTALL_DIR/macs2</destination>
|
|
0
|
13 </action>
|
|
|
14 <action type="set_environment">
|
|
|
15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
|
|
|
16 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python2.7/site-packages</environment_variable>
|
|
|
17 </action>
|
|
|
18 </actions>
|
|
|
19 </install>
|
|
|
20 <readme>Macs2 depends on having python2.7 installed on all nodes of the work cluster</readme>
|
|
|
21 </package>
|
|
|
22 </tool_dependency>
|
