Mercurial > repos > yves > count_lines_in_file
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author | yves |
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date | Wed, 25 Jan 2012 09:47:54 -0500 |
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<tool id="count_lines_in_file" name="Count Lines in file"> <description>Count Lines in a file</description> <command interpreter="perl">count_lines_in_file.pl $input_1 $output</command> <inputs> <param format="txt" name="input_1" type="data" label="Any text file"></param> </inputs> <outputs> <data format="txt" name="output" /> </outputs> <tests> <test> <param name="input_1" value="matrix_generator_for_pc_and_lda_input_1.tabular"/> <output name="output" file="matrix_generator_for_pc_and_lda_output.tabular"/> </test> </tests> <help> .. class:: infomark **What it does** This tool counts lines in a txt file using the Y.W alogirtm as described in Carrel et al., 2006 (PMID: 17009873) *Carrel L, Wetzels Y et al. (2006) Genomic Environment Predicts Expression Patterns on the Human Inactive X Chromosom e. PLoS Genet 2(9): e151. doi:10.1371/journal.pgen.0020151* ----- **Example** - Input file (Source file First) </help> </tool>