Mercurial > repos > yves > count_lines_in_file
changeset 0:72c8df33ec90 default tip
Uploaded
| author | yves |
|---|---|
| date | Wed, 25 Jan 2012 09:47:54 -0500 |
| parents | |
| children | |
| files | count_lines_in_file.xml |
| diffstat | 1 files changed, 41 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/count_lines_in_file.xml Wed Jan 25 09:47:54 2012 -0500 @@ -0,0 +1,41 @@ +<tool id="count_lines_in_file" name="Count Lines in file"> + <description>Count Lines in a file</description> + <command interpreter="perl">count_lines_in_file.pl $input_1 $output</command> + + <inputs> + <param format="txt" name="input_1" type="data" label="Any text file"></param> + </inputs> + + <outputs> + <data format="txt" name="output" /> + </outputs> + + <tests> + <test> + <param name="input_1" value="matrix_generator_for_pc_and_lda_input_1.tabular"/> + <output name="output" file="matrix_generator_for_pc_and_lda_output.tabular"/> + </test> + </tests> + + <help> + +.. class:: infomark + +**What it does** + +This tool counts lines in a txt file using the Y.W alogirtm as described in Carrel et al., 2006 (PMID: 17009873) + +*Carrel L, Wetzels Y et al. (2006) Genomic Environment Predicts Expression Patterns on the Human Inactive X Chromosom +e. PLoS Genet 2(9): e151. doi:10.1371/journal.pgen.0020151* + +----- + +**Example** + +- Input file (Source file First) + + + +</help> + +</tool> \ No newline at end of file