Mercurial > repos > youyuh48 > kraken_tools

annotate src/org/Report_Kraken2_on_Zymo.tabular @ 0:5ca43a5fac32 draft

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planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
author youyuh48
date Sun, 02 May 2021 04:46:00 +0000
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0
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
1 0.10 1 1 U 0 unclassified
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
2 99.90 988 0 R 1 root
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
3 99.90 988 0 R1 131567 cellular organisms
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
4 99.90 988 0 D 2 Bacteria
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
5 65.62 649 0 D1 1783272 Terrabacteria group
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
6 65.62 649 0 P 1239 Firmicutes
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
7 65.62 649 1 C 91061 Bacilli
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
8 49.95 494 0 O 1385 Bacillales
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
9 19.72 195 0 F 186817 Bacillaceae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
10 19.51 193 6 G 1386 Bacillus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
11 13.95 138 2 G1 653685 Bacillus subtilis group
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
12 9.71 96 4 G2 1938374 Bacillus amyloliquefaciens group
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
13 7.79 77 56 S 492670 Bacillus velezensis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
14 1.92 19 19 S1 1458206 Bacillus velezensis NJN-6
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
15 0.20 2 2 S1 1449088 Bacillus velezensis TrigoCor1448
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
16 1.52 15 12 S 1390 Bacillus amyloliquefaciens
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
17 0.30 3 3 S1 1034836 Bacillus amyloliquefaciens XH7
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
18 3.84 38 12 S 1423 Bacillus subtilis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
19 1.11 11 5 S1 135461 Bacillus subtilis subsp. subtilis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
20 0.61 6 6 S2 535024 Bacillus subtilis subsp. subtilis str. SMY
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
21 0.61 6 6 S1 86029 Bacillus subtilis subsp. natto
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
22 0.40 4 4 S1 483913 Bacillus subtilis subsp. inaquosorum
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
23 0.30 3 0 S1 96241 Bacillus subtilis subsp. spizizenii
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
24 0.30 3 3 S2 1052585 Bacillus subtilis subsp. spizizenii TU-B-10
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
25 0.20 2 2 S1 936156 Bacillus subtilis BSn5
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
26 0.10 1 1 S 1402 Bacillus licheniformis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
27 0.10 1 1 S 1648923 Bacillus paralicheniformis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
28 4.65 46 5 G1 86661 Bacillus cereus group
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
29 1.72 17 1 S 1396 Bacillus cereus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
30 1.42 14 14 S1 1003239 Bacillus cereus C1L
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
31 0.20 2 2 S1 269801 Bacillus cereus G9241
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
32 1.31 13 8 S 1428 Bacillus thuringiensis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
33 0.20 2 0 S1 29339 Bacillus thuringiensis serovar kurstaki
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
34 0.20 2 2 S2 1279365 Bacillus thuringiensis serovar kurstaki str. HD73
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
35 0.20 2 2 S1 1195464 Bacillus thuringiensis MC28
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
36 0.10 1 1 S1 1441 Bacillus thuringiensis serovar morrisoni
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
37 1.11 11 11 S 1392 Bacillus anthracis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
38 0.10 1 1 S 1783501 Bacillus freudenreichii
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
39 0.10 1 1 S 1547283 Bacillus weihaiensis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
40 0.10 1 0 G1 185979 unclassified Bacillus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
41 0.10 1 1 S 2049935 Bacillus sp. Lzh-5
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
42 0.10 1 0 G 182709 Oceanobacillus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
43 0.10 1 0 G1 2630292 unclassified Oceanobacillus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
44 0.10 1 1 S 2052660 Oceanobacillus sp. 160
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
45 0.10 1 0 F1 197483 unclassified Bacillaceae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
46 0.10 1 1 S 2594883 Bacillaceae bacterium TKL69
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
47 17.49 173 0 F 90964 Staphylococcaceae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
48 17.49 173 7 G 1279 Staphylococcus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
49 15.37 152 80 S 1280 Staphylococcus aureus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
50 6.07 60 34 S1 46170 Staphylococcus aureus subsp. aureus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
51 0.51 5 5 S2 1006543 Staphylococcus aureus subsp. aureus T0131
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
52 0.51 5 5 S2 1074919 Staphylococcus aureus subsp. aureus ST228
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
53 0.40 4 4 S2 282458 Staphylococcus aureus subsp. aureus MRSA252
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
54 0.30 3 3 S2 1381115 Staphylococcus aureus subsp. aureus Tager 104
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
55 0.30 3 3 S2 548470 Staphylococcus aureus subsp. aureus MN8
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
56 0.30 3 3 S2 523796 Staphylococcus aureus subsp. aureus ST398
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
57 0.20 2 2 S2 1392476 Staphylococcus aureus subsp. aureus 6850
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
58 0.10 1 1 S2 282459 Staphylococcus aureus subsp. aureus MSSA476
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
59 1.01 10 10 S1 1229492 Staphylococcus aureus 08BA02176
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
60 0.20 2 2 S1 273036 Staphylococcus aureus RF122
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
61 0.40 4 4 S 29380 Staphylococcus caprae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
62 0.20 2 2 S 1290 Staphylococcus hominis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
63 0.20 2 0 G1 91994 unclassified Staphylococcus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
64 0.20 2 2 S 1715860 Staphylococcus sp. AntiMn-1
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
65 0.10 1 0 S 1283 Staphylococcus haemolyticus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
66 0.10 1 1 S1 279808 Staphylococcus haemolyticus JCSC1435
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
67 0.10 1 1 S 643214 Staphylococcus stepanovicii
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
68 0.10 1 1 S 29388 Staphylococcus capitis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
69 0.10 1 1 S 246432 Staphylococcus equorum
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
70 0.10 1 1 S 214473 Staphylococcus nepalensis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
71 0.10 1 1 S 150056 Staphylococcus fleurettii
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
72 12.74 126 0 F 186820 Listeriaceae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
73 12.74 126 9 G 1637 Listeria
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
74 11.73 116 101 S 1639 Listeria monocytogenes
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
75 0.71 7 7 S1 882095 Listeria monocytogenes ATCC 19117
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
76 0.30 3 3 S1 1027396 Listeria monocytogenes str. Scott A
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
77 0.30 3 3 S1 882094 Listeria monocytogenes L312
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
78 0.10 1 1 S1 932919 Listeria monocytogenes SLCC2755
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
79 0.10 1 1 S1 879090 Listeria monocytogenes SLCC7179
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
80 0.10 1 1 S 1006155 Listeria weihenstephanensis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
81 15.57 154 2 O 186826 Lactobacillales
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
82 10.62 105 0 F 33958 Lactobacillaceae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
83 10.62 105 3 G 1578 Lactobacillus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
84 10.31 102 100 S 1613 Lactobacillus fermentum
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
85 0.20 2 2 S1 712938 Lactobacillus fermentum CECT 5716
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
86 4.35 43 0 F 81852 Enterococcaceae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
87 4.15 41 1 G 1350 Enterococcus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
88 3.13 31 17 S 1351 Enterococcus faecalis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
89 1.31 13 13 S1 565651 Enterococcus faecalis ARO1/DG
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
90 0.10 1 1 S1 1287066 Enterococcus faecalis DENG1
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
91 0.91 9 9 S 1352 Enterococcus faecium
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
92 0.20 2 0 G 2737 Vagococcus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
93 0.20 2 0 G1 2648499 unclassified Vagococcus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
94 0.20 2 2 S 2571750 Vagococcus sp. MN-17
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
95 0.40 4 0 F 1300 Streptococcaceae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
96 0.40 4 2 G 1301 Streptococcus
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
97 0.10 1 0 G1 119603 Streptococcus dysgalactiae group
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
98 0.10 1 0 S 1334 Streptococcus dysgalactiae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
99 0.10 1 1 S1 119602 Streptococcus dysgalactiae subsp. equisimilis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
100 0.10 1 1 S 1314 Streptococcus pyogenes
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
101 34.28 339 0 P 1224 Proteobacteria
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
102 34.28 339 0 C 1236 Gammaproteobacteria
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
103 27.60 273 0 O 91347 Enterobacterales
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
104 27.60 273 10 F 543 Enterobacteriaceae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
105 15.57 154 0 G 561 Escherichia
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
106 15.57 154 112 S 562 Escherichia coli
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
107 0.91 9 4 S1 83333 Escherichia coli K-12
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
108 0.30 3 3 S2 316407 Escherichia coli str. K-12 substr. W3110
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
109 0.20 2 2 S2 879462 Escherichia coli str. K-12 substr. MG1655star
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
110 0.81 8 6 S1 83334 Escherichia coli O157:H7
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
111 0.10 1 1 S2 155864 Escherichia coli O157:H7 str. EDL933
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
112 0.10 1 1 S2 502346 Escherichia coli O157:H7 str. TW14588
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
113 0.40 4 4 S1 362663 Escherichia coli 536
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
114 0.40 4 4 S1 1050617 Escherichia coli UMNF18
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
115 0.30 3 3 S1 316435 Escherichia coli Nissle 1917
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
116 0.30 3 0 S1 861906 Escherichia coli O44:H18
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
117 0.30 3 3 S2 216592 Escherichia coli 042
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
118 0.20 2 2 S1 405955 Escherichia coli APEC O1
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
119 0.20 2 1 S1 1038927 Escherichia coli O104:H4
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
120 0.10 1 1 S2 1133852 Escherichia coli O104:H4 str. 2011C-3493
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
121 0.20 2 2 S1 2048781 Escherichia coli O27:H7
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
122 0.10 1 0 S1 1055539 Escherichia coli O91
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
123 0.10 1 1 S2 1055545 Escherichia coli O91 str. RM7190
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
124 0.10 1 1 S1 1322345 Escherichia coli ATCC 25922
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
125 0.10 1 1 S1 331112 Escherichia coli HS
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
126 0.10 1 1 S1 1392858 Escherichia coli M12
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
127 0.10 1 1 S1 1392854 Escherichia coli M8
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
128 8.90 88 2 G 590 Salmonella
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
129 8.59 85 6 S 28901 Salmonella enterica
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
130 7.79 77 5 S1 59201 Salmonella enterica subsp. enterica
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
131 2.33 23 23 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:-
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
132 0.71 7 7 S2 29474 Salmonella enterica subsp. enterica serovar California
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
133 0.61 6 6 S2 286783 Salmonella enterica subsp. enterica serovar Indiana
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
134 0.61 6 6 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
135 0.51 5 5 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
136 0.30 3 0 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
137 0.10 1 1 S3 763921 Salmonella enterica subsp. enterica serovar Montevideo str. 42N
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
138 0.10 1 1 S3 1454604 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1904
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
139 0.10 1 1 S3 1454598 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1901
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
140 0.30 3 2 S2 58712 Salmonella enterica subsp. enterica serovar Anatum
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
141 0.10 1 1 S3 1399029 Salmonella enterica subsp. enterica serovar Anatum str. CFSAN003961
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
142 0.30 3 1 S2 28150 Salmonella enterica subsp. enterica serovar Senftenberg
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
143 0.20 2 2 S3 1399047 Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
144 0.20 2 2 S2 595 Salmonella enterica subsp. enterica serovar Infantis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
145 0.20 2 2 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
146 0.10 1 0 S2 108619 Salmonella enterica subsp. enterica serovar Newport
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
147 0.10 1 1 S3 930779 Salmonella enterica subsp. enterica serovar Newport str. Levine 15
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
148 0.10 1 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
149 0.10 1 1 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
150 0.10 1 1 S2 605 Salmonella enterica subsp. enterica serovar Pullorum
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
151 0.10 1 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
152 0.10 1 1 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
153 0.10 1 1 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
154 0.10 1 1 S2 90370 Salmonella enterica subsp. enterica serovar Typhi
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
155 0.10 1 0 S2 1243585 Salmonella enterica subsp. enterica serovar Ouakam
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
156 0.10 1 1 S3 1243586 Salmonella enterica subsp. enterica serovar Ouakam str. SA20034636
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
157 0.10 1 0 S2 604 Salmonella enterica subsp. enterica serovar Gallinarum/pullorum
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
158 0.10 1 1 S3 1225522 Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
159 0.10 1 1 S2 98360 Salmonella enterica subsp. enterica serovar Dublin
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
160 0.10 1 1 S2 2021403 Salmonella enterica subsp. enterica serovar Adjame
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
161 0.10 1 1 S2 119912 Salmonella enterica subsp. enterica serovar Choleraesuis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
162 0.10 1 1 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:-
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
163 0.20 2 0 S1 59202 Salmonella enterica subsp. salamae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
164 0.20 2 0 S2 1243601 Salmonella enterica subsp. salamae serovar 55:k:z39
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
165 0.20 2 2 S3 1243602 Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
166 0.10 1 0 G1 2614656 unclassified Salmonella
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
167 0.10 1 1 S 2664291 Salmonella sp. HNK130
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
168 1.62 16 0 G 570 Klebsiella
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
169 1.42 14 9 S 573 Klebsiella pneumoniae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
170 0.30 3 3 S1 72407 Klebsiella pneumoniae subsp. pneumoniae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
171 0.20 2 2 S1 1049565 Klebsiella pneumoniae KCTC 2242
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
172 0.10 1 1 S 571 Klebsiella oxytoca
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
173 0.10 1 1 S 1134687 Klebsiella michiganensis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
174 0.40 4 0 G 547 Enterobacter
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
175 0.20 2 0 G1 354276 Enterobacter cloacae complex
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
176 0.10 1 1 S 550 Enterobacter cloacae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
177 0.10 1 1 S 158836 Enterobacter hormaechei
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
178 0.20 2 2 S 881260 Enterobacter bugandensis
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
179 0.10 1 1 G 620 Shigella
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
180 6.67 66 0 O 72274 Pseudomonadales
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
181 6.67 66 0 F 135621 Pseudomonadaceae
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
182 6.67 66 4 G 286 Pseudomonas
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
183 5.46 54 1 G1 136841 Pseudomonas aeruginosa group
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
184 5.36 53 35 S 287 Pseudomonas aeruginosa
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
185 0.81 8 8 S1 1408273 Pseudomonas aeruginosa LESB65
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
186 0.40 4 4 S1 1408272 Pseudomonas aeruginosa LES431
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
187 0.40 4 4 S1 1408275 Pseudomonas aeruginosa LESlike4
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
188 0.10 1 1 S1 1279008 Pseudomonas aeruginosa PA1R
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
189 0.10 1 1 S1 1352355 Pseudomonas aeruginosa c7447m
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
190 0.71 7 0 G1 2583993 unclassified Pseudomonas
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
191 0.61 6 6 S 2559074 Pseudomonas sp. S150
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
192 0.10 1 1 S 2662033 Pseudomonas sp. 14181154
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
193 0.10 1 0 G1 136842 Pseudomonas chlororaphis group
5ca43a5fac32 planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
youyuh48
parents:
diff changeset
194 0.10 1 1 S 47884 Pseudomonas taetrolens