Mercurial > repos > yhoogstrate > varscan_mpileup2snp_from_bam
changeset 47:4ae3d1a2acf7 draft
Uploaded
author | yhoogstrate |
---|---|
date | Wed, 05 Mar 2014 08:00:55 -0500 |
parents | 02fcb48ebc74 |
children | e3eb1ca50b8d |
files | varscan_mpileup2snp_from_bam.xml |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/varscan_mpileup2snp_from_bam.xml Wed Mar 05 07:58:31 2014 -0500 +++ b/varscan_mpileup2snp_from_bam.xml Wed Mar 05 08:00:55 2014 -0500 @@ -171,7 +171,7 @@ </when> </conditional> - <param name="sort_mpileup" type="select" display="checkboxes" multiple="false" checked="false" truevalue="true" falsevalue="false" label="Sort mpileup file" help="Because parallelization may disrupt the outputs order, sorting can be conveniet for e.g. testing. Notice that this function has only use in a limited number of situations but costs CPU usage. Only use it if its really neccesairy." /> + <param name="sort_mpileup" type="boolean" truevalue="true" falsevalue="false" label="Sort mpileup file" help="Because parallelization may disrupt the outputs order, sorting can be conveniet for e.g. testing. Notice that this function has only use in a limited number of situations but costs CPU usage. Only use it if its really neccesairy." /> <conditional name="extended_parameters"> <param name="parameters" type="select" label="Advanced parameters" help="For more advanced VarScan and samtools settings.">