# HG changeset patch
# User yhoogstrate
# Date 1394024455 18000
# Node ID 4ae3d1a2acf71ed07641bfdd9bd73fa26f82183f
# Parent  02fcb48ebc74122f1c3cf4830bb859187faf2d4b
Uploaded

diff -r 02fcb48ebc74 -r 4ae3d1a2acf7 varscan_mpileup2snp_from_bam.xml
--- a/varscan_mpileup2snp_from_bam.xml	Wed Mar 05 07:58:31 2014 -0500
+++ b/varscan_mpileup2snp_from_bam.xml	Wed Mar 05 08:00:55 2014 -0500
@@ -171,7 +171,7 @@
 			</when>
 		</conditional>
 		
-		<param name="sort_mpileup" type="select" display="checkboxes" multiple="false" checked="false" truevalue="true" falsevalue="false" label="Sort mpileup file" help="Because parallelization may disrupt the outputs order, sorting can be conveniet for e.g. testing. Notice that this function has only use in a limited number of situations but costs CPU usage. Only use it if its really neccesairy." />
+		<param name="sort_mpileup" type="boolean" truevalue="true" falsevalue="false" label="Sort mpileup file" help="Because parallelization may disrupt the outputs order, sorting can be conveniet for e.g. testing. Notice that this function has only use in a limited number of situations but costs CPU usage. Only use it if its really neccesairy." />
 		
 		<conditional name="extended_parameters">
 			<param name="parameters" type="select" label="Advanced parameters" help="For more advanced VarScan and samtools settings.">