Mercurial > repos > yhoogstrate > varscan_mpileup2snp_from_bam

changeset 62:34b5f8c5c16e draft

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Uploaded
author yhoogstrate
date Wed, 05 Mar 2014 10:23:12 -0500
parents 0bab34a58764
children 38ea7a0450bc
files varscan_mpileup2snp_from_bam.xml
diffstat 1 files changed, 1 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/varscan_mpileup2snp_from_bam.xml	Wed Mar 05 10:23:06 2014 -0500
+++ b/varscan_mpileup2snp_from_bam.xml	Wed Mar 05 10:23:12 2014 -0500
@@ -89,9 +89,7 @@
 			#end if
 			
 			#if $varscan_output_vcf
-			 --output-vcf 0 
-			#else
-			 --output-vcf 0 
+			 --output-vcf 1 
 			#end if
 			
 			 2> stderr_2.txt